Training materials
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SQL with Python
SQL Python jupyter-notebook sql -
Learning about one gene across biological resources and formats
work-in-progress -
Version Control with Git
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A (very) brief history of genomics
work-in-progress gnmx -
SARS-CoV-2 Viral Sample Alignment and Variant Visualization
covid19 gmod jbrowse1 -
Data Manipulation Olympics
cyoa next-steps -
SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis
ncbi covid19 upload -
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
covid19 virology one-health -
Removal of human reads from SARS-CoV-2 sequencing data
covid19 -
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
covid19 virology one-health